J5_9HAM_001

3D structure

PDB id

9HAM (explore in PDB, NAKB, or RNA 3D Hub)

Description

C_(L29)-/(L22)- precursor supplemented with Api137

Experimental method

ELECTRON MICROSCOPY

Resolution

5.06 Å

Loop

Sequence

CGAUGAAG*CGAAUG*CA*UAUCA*UGAGG

Length

26 nucleotides

Bulged bases

9HAM|1|A|U|50

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9HAM|1|A|C|47
9HAM|1|A|G|48
9HAM|1|A|A|49
9HAM|1|A|U|50
9HAM|1|A|G|51
9HAM|1|A|A|52
9HAM|1|A|A|53
9HAM|1|A|G|54
*
9HAM|1|A|C|116
9HAM|1|A|G|117
9HAM|1|A|A|118
9HAM|1|A|A|119
9HAM|1|A|U|120
9HAM|1|A|G|121
*
9HAM|1|A|C|130
9HAM|1|A|A|131
*
9HAM|1|A|U|148
9HAM|1|A|A|149
9HAM|1|A|U|150
9HAM|1|A|C|151
9HAM|1|A|A|152
*
9HAM|1|A|U|174
9HAM|1|A|G|175
9HAM|1|A|A|176
9HAM|1|A|G|177
9HAM|1|A|G|178

Current chains

Chain A

23S ribosomal RNA

Nearby chains