J5_9HLZ_005
3D structure
- PDB id
- 9HLZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Translational activators Aep1, Aep2 and Atp25 in complex with mRNA and the yeast mitochondrial ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CGAA*UGUAAAC*GU*AU*ACAG
- Length
- 19 nucleotides
- Bulged bases
- 9HLZ|1|r|A|109, 9HLZ|1|r|C|356, 9HLZ|1|r|A|357
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9HLZ|1|r|C|65
9HLZ|1|r|G|66
9HLZ|1|r|A|67
9HLZ|1|r|A|68
*
9HLZ|1|r|U|106
9HLZ|1|r|G|107
9HLZ|1|r|U|108
9HLZ|1|r|A|109
9HLZ|1|r|A|110
9HLZ|1|r|A|111
9HLZ|1|r|C|112
*
9HLZ|1|r|G|321
9HLZ|1|r|U|322
*
9HLZ|1|r|A|342
9HLZ|1|r|U|343
*
9HLZ|1|r|A|355
9HLZ|1|r|C|356
9HLZ|1|r|A|357
9HLZ|1|r|G|358
Current chains
- Chain r
- 15S mitochondrial rRNA
Nearby chains
- Chain 2
- Small ribosomal subunit protein mS41
- Chain II
- Large ribosomal subunit protein uL14m
- Chain MM
- Large ribosomal subunit protein bL19m
- Chain P
- Small ribosomal subunit protein bS16m
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