J5_9HUQ_001

3D structure

PDB id

9HUQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of WT E.coli ribosome with complexed filament nascent chain at length 47, with P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.49 Å

Loop

Sequence

CGAUGAAG*CGAAUG*CA*UAU*AGG

Length

22 nucleotides

Bulged bases

9HUQ|1|b|U|50

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9HUQ|1|b|C|47
9HUQ|1|b|G|48
9HUQ|1|b|A|49
9HUQ|1|b|U|50
9HUQ|1|b|G|51
9HUQ|1|b|A|52
9HUQ|1|b|A|53
9HUQ|1|b|G|54
*
9HUQ|1|b|C|116
9HUQ|1|b|G|117
9HUQ|1|b|A|118
9HUQ|1|b|A|119
9HUQ|1|b|U|120
9HUQ|1|b|G|121
*
9HUQ|1|b|C|130
9HUQ|1|b|A|131
*
9HUQ|1|b|U|148
9HUQ|1|b|A|149
9HUQ|1|b|U|150
*
9HUQ|1|b|A|176
9HUQ|1|b|G|177
9HUQ|1|b|G|178

Current chains

Chain b

23S rRNA

Nearby chains

Chain 6

Large ribosomal subunit protein bL34