J5_9I5T_003
3D structure
- PDB id
- 9I5T (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 50S subunit of P. gingivalis ribosome with Lefamulin
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- CGAGUU*AGAC*GUAC*GC*GCAAAUG
- Length
- 23 nucleotides
- Bulged bases
- 9I5T|1|A|U|1284
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9I5T|1|A|C|606
9I5T|1|A|G|607
9I5T|1|A|A|608
9I5T|1|A|G|609
9I5T|1|A|U|610
9I5T|1|A|U|611
*
9I5T|1|A|A|703
9I5T|1|A|G|704
9I5T|1|A|A|705
9I5T|1|A|C|706
*
9I5T|1|A|G|844
9I5T|1|A|U|845
9I5T|1|A|A|846
9I5T|1|A|C|847
*
9I5T|1|A|G|1224
9I5T|1|A|C|1225
*
9I5T|1|A|G|1279
9I5T|1|A|C|1280
9I5T|1|A|A|1281
9I5T|1|A|A|1282
9I5T|1|A|A|1283
9I5T|1|A|U|1284
9I5T|1|A|G|1285
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 7
- Large ribosomal subunit protein bL35
- Chain F
- Large ribosomal subunit protein uL4
- Chain O
- Large ribosomal subunit protein uL15
- Chain T
- Large ribosomal subunit protein bL20
- Chain U
- Large ribosomal subunit protein bL21
Coloring options: