J5_9I5V_001
3D structure
- PDB id
- 9I5V (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S P. gingivalis ribosome erm-delta-porN strain
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- CGG*CGUGC*GAA*UA*UG
- Length
- 15 nucleotides
- Bulged bases
- 9I5V|1|A|G|555, 9I5V|1|A|U|584
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9I5V|1|A|C|554
9I5V|1|A|G|555
9I5V|1|A|G|556
*
9I5V|1|A|C|582
9I5V|1|A|G|583
9I5V|1|A|U|584
9I5V|1|A|G|585
9I5V|1|A|C|586
*
9I5V|1|A|G|599
9I5V|1|A|A|600
9I5V|1|A|A|601
*
9I5V|1|A|U|1290
9I5V|1|A|A|1291
*
9I5V|1|A|U|2027
9I5V|1|A|G|2028
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 4
- Large ribosomal subunit protein bL32
- Chain F
- Large ribosomal subunit protein uL4
- Chain M
- Large ribosomal subunit protein uL13
- Chain T
- Large ribosomal subunit protein bL20
- Chain U
- Large ribosomal subunit protein bL21
- Chain V
- Large ribosomal subunit protein uL22
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