J5_9I5V_006
3D structure
- PDB id
- 9I5V (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S P. gingivalis ribosome erm-delta-porN strain
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- CUAG*CGUGAAGGAAGACAGU*AGGAUUGUAAACUUCUU*GAAACA*UGCGAG
- Length
- 49 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9I5V|1|a|C|36
9I5V|1|a|U|37
9I5V|1|a|A|38
9I5V|1|a|G|39
*
9I5V|1|a|C|408
9I5V|1|a|G|409
9I5V|1|a|U|410
9I5V|1|a|G|411
9I5V|1|a|A|412
9I5V|1|a|A|413
9I5V|1|a|G|414
9I5V|1|a|G|415
9I5V|1|a|A|416
9I5V|1|a|A|417
9I5V|1|a|G|418
9I5V|1|a|A|419
9I5V|1|a|C|420
9I5V|1|a|A|421
9I5V|1|a|G|422
9I5V|1|a|U|423
*
9I5V|1|a|A|428
9I5V|1|a|G|429
9I5V|1|a|G|430
9I5V|1|a|A|431
9I5V|1|a|U|432
9I5V|1|a|U|433
9I5V|1|a|G|434
9I5V|1|a|U|435
9I5V|1|a|A|436
9I5V|1|a|A|437
9I5V|1|a|A|438
9I5V|1|a|C|439
9I5V|1|a|U|440
9I5V|1|a|U|441
9I5V|1|a|C|442
9I5V|1|a|U|443
9I5V|1|a|U|444
*
9I5V|1|a|G|494
9I5V|1|a|A|495
9I5V|1|a|A|496
9I5V|1|a|A|497
9I5V|1|a|C|498
9I5V|1|a|A|499
*
9I5V|1|a|U|543
9I5V|1|a|G|544
9I5V|1|a|C|545
9I5V|1|a|G|546
9I5V|1|a|A|547
9I5V|1|a|G|548
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain c
- Small ribosomal subunit protein bS16
- Chain j
- Small ribosomal subunit protein uS12
- Chain l
- Small ribosomal subunit protein uS4
Coloring options: