J5_9I88_008
3D structure
- PDB id
- 9I88 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the wild-type Staphylococcus aureus 70S ribosome complexed with clincelin
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.98 Å
Loop
- Sequence
- CUGG*CGUG*CUGUUA*UCAGAAAG*CAAG
- Length
- 26 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9I88|1|a|C|37
9I88|1|a|U|38
9I88|1|a|G|39
9I88|1|a|G|40
*
9I88|1|a|C|411
9I88|1|a|G|412
9I88|1|a|U|413
9I88|1|a|G|414
*
9I88|1|a|C|444
9I88|1|a|U|445
9I88|1|a|G|446
9I88|1|a|U|447
9I88|1|a|U|448
9I88|1|a|A|449
*
9I88|1|a|U|501
9I88|1|a|C|502
9I88|1|a|A|503
9I88|1|a|G|504
9I88|1|a|A|505
9I88|1|a|A|506
9I88|1|a|A|507
9I88|1|a|G|508
*
9I88|1|a|C|553
9I88|1|a|A|554
9I88|1|a|A|555
9I88|1|a|G|556
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain e
- Small ribosomal subunit protein uS4
- Chain m
- Small ribosomal subunit protein uS12
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