J5_9N70_001

3D structure

PDB id

9N70 (explore in PDB, NAKB, or RNA 3D Hub)

Description

SSU processome maturation and disassembly, State E

Experimental method

ELECTRON MICROSCOPY

Resolution

5.17 Å

Loop

Sequence

CUUGU*AAAUAAC*GGAAUG*CAAU*AUAG

Length

26 nucleotides

Bulged bases

9N70|1|L1|A|544, 9N70|1|L1|A|594

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9N70|1|L1|C|31
9N70|1|L1|U|32
9N70|1|L1|U|33
9N70|1|L1|G|34
9N70|1|L1|U|35
*
9N70|1|L1|A|473
9N70|1|L1|A|474
9N70|1|L1|A|475
9N70|1|L1|U|476
9N70|1|L1|A|477
9N70|1|L1|A|478
9N70|1|L1|C|479
*
9N70|1|L1|G|509
9N70|1|L1|G|510
9N70|1|L1|A|511
9N70|1|L1|A|512
9N70|1|L1|U|513
9N70|1|L1|G|514
*
9N70|1|L1|C|543
9N70|1|L1|A|544
9N70|1|L1|A|545
9N70|1|L1|U|546
*
9N70|1|L1|A|592
9N70|1|L1|U|593
9N70|1|L1|A|594
9N70|1|L1|G|595

Current chains

Chain L1

18S rRNA

Nearby chains

Chain L9

40S ribosomal protein S9-A

Chain NB

Something about silencing protein 10

Chain SI

Ribosome biogenesis protein BMS1

Chain SR

40S ribosomal protein S23-A