J5_9NO7_005
3D structure
- PDB id
- 9NO7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the wild-type Thermus thermophilus 70S ribosome in complex with mRNA, A-site Q230-N5-methylated Release Factor 1, and P-site 2'-deoxy-A76-fMEAAAKC-peptidyl-tRNAcys at 2.13A resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.13 Å
Loop
- Sequence
- GCAAGUUGG*UG*CC*GUGAACAGG*CGC
- Length
- 25 nucleotides
- Bulged bases
- 9NO7|1|A|G|1758, 9NO7|1|A|G|1763
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9NO7|1|A|G|1674
9NO7|1|A|C|1675
9NO7|1|A|A|1676
9NO7|1|A|A|1677
9NO7|1|A|G|1678
9NO7|1|A|U|1679
9NO7|1|A|U|1680
9NO7|1|A|G|1681
9NO7|1|A|G|1682
*
9NO7|1|A|U|1706
9NO7|1|A|G|1707
*
9NO7|1|A|C|1751
9NO7|1|A|C|1752
*
9NO7|1|A|G|1756
9NO7|1|A|U|1757
9NO7|1|A|G|1758
9NO7|1|A|A|1759
9NO7|1|A|A|1760
9NO7|1|A|C|1761
9NO7|1|A|A|1762
9NO7|1|A|G|1763
9NO7|1|A|G|1764
*
9NO7|1|A|C|1988
9NO7|1|A|G|1989
9NO7|1|A|C|1990
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
- Chain E
- 50S ribosomal protein L3
- Chain O
- 50S ribosomal protein L14
- Chain T
- 50S ribosomal protein L19
- Chain a
- Small subunit ribosomal RNA; SSU rRNA
Coloring options: