J5_9OFV_002
3D structure
- PDB id
- 9OFV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Consensus reconstruction of the eukaryotic Ribosome-associated Quality Control complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.16 Å
Loop
- Sequence
- GGAGUC*GGAC*GUUC*GC*GCAGAUC
- Length
- 23 nucleotides
- Bulged bases
- 9OFV|1|f|U|1436
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9OFV|1|f|G|658
9OFV|1|f|G|659
9OFV|1|f|A|660
9OFV|1|f|G|661
9OFV|1|f|U|662
9OFV|1|f|C|663
*
9OFV|1|f|G|799
9OFV|1|f|G|800
9OFV|1|f|A|801
9OFV|1|f|C|802
*
9OFV|1|f|G|941
9OFV|1|f|U|942
9OFV|1|f|U|943
9OFV|1|f|C|944
*
9OFV|1|f|G|1375
9OFV|1|f|C|1376
*
9OFV|1|f|G|1431
9OFV|1|f|C|1432
9OFV|1|f|A|1433
9OFV|1|f|G|1434
9OFV|1|f|A|1435
9OFV|1|f|U|1436
9OFV|1|f|C|1437
Current chains
- Chain f
- 25S rRNA
Nearby chains
- Chain N
- 60S ribosomal protein L28
- Chain R
- Large ribosomal subunit protein eL32
- Chain i
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain l
- Large ribosomal subunit protein uL4A
- Chain t
- 60S ribosomal protein L13-A
Coloring options: