J5_9OFV_003
3D structure
- PDB id
- 9OFV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Consensus reconstruction of the eukaryotic Ribosome-associated Quality Control complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.16 Å
Loop
- Sequence
- CGAG*CGUAA*UGAACGUAG*CGA*UAAGAG
- Length
- 27 nucleotides
- Bulged bases
- 9OFV|1|f|U|719, 9OFV|1|f|A|784, 9OFV|1|f|G|785
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9OFV|1|f|C|675
9OFV|1|f|G|676
9OFV|1|f|A|677
9OFV|1|f|G|678
*
9OFV|1|f|C|702
9OFV|1|f|G|703
9OFV|1|f|U|704
9OFV|1|f|A|705
9OFV|1|f|A|706
*
9OFV|1|f|U|713
9OFV|1|f|G|714
9OFV|1|f|A|715
9OFV|1|f|A|716
9OFV|1|f|C|717
9OFV|1|f|G|718
9OFV|1|f|U|719
9OFV|1|f|A|720
9OFV|1|f|G|721
*
9OFV|1|f|C|749
9OFV|1|f|G|750
9OFV|1|f|A|751
*
9OFV|1|f|U|782
9OFV|1|f|A|783
9OFV|1|f|A|784
9OFV|1|f|G|785
9OFV|1|f|A|786
9OFV|1|f|G|787
Current chains
- Chain f
- 25S rRNA
Nearby chains
- Chain 4
- 60S ribosomal protein L18-A
- Chain N
- 60S ribosomal protein L28
- Chain O
- Large ribosomal subunit protein eL29
- Chain V
- 60S ribosomal protein L36-A
- Chain l
- Large ribosomal subunit protein uL4A
- Chain t
- 60S ribosomal protein L13-A
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