J5_9Q7Q_006

3D structure

PDB id

9Q7Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

ABCE1-eRF1-RNC-AMD1C

Experimental method

ELECTRON MICROSCOPY

Resolution

2.86 Å

Loop

Sequence

CUUGU*AAAUAAC*GGAAUG*CCAU*AUAG

Length

26 nucleotides

Bulged bases

9Q7Q|1|K|C|593

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9Q7Q|1|K|C|30
9Q7Q|1|K|U|31
9Q7Q|1|K|U|32
9Q7Q|1|K|G|33
9Q7Q|1|K|U|34
*
9Q7Q|1|K|A|521
9Q7Q|1|K|A|522
9Q7Q|1|K|A|523
9Q7Q|1|K|U|524
9Q7Q|1|K|A|525
9Q7Q|1|K|A|526
9Q7Q|1|K|C|527
*
9Q7Q|1|K|G|558
9Q7Q|1|K|G|559
9Q7Q|1|K|A|560
9Q7Q|1|K|A|561
9Q7Q|1|K|U|562
9Q7Q|1|K|G|563
*
9Q7Q|1|K|C|592
9Q7Q|1|K|C|593
9Q7Q|1|K|A|594
9Q7Q|1|K|U|595
*
9Q7Q|1|K|A|641
9Q7Q|1|K|U|642
9Q7Q|1|K|A|643
9Q7Q|1|K|G|644

Current chains

Chain K

18S rRNA

Nearby chains

Chain AA

40S ribosomal protein S30

Chain DD

Ribosomal protein S9 (Predicted)

Chain VV

uS12