J5_9QEG_007

3D structure

PDB id

9QEG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the 70S ribosome of a MLSb sensitive S. aureus strain "KES34" in complex with solithromycin

Experimental method

ELECTRON MICROSCOPY

Resolution

2.21 Å

Loop

Sequence

CUGG*CGUG*CUGUUA*UCAGAAAG*CAAG

Length

26 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QEG|1|Aa|C|37
9QEG|1|Aa|U|38
9QEG|1|Aa|G|39
9QEG|1|Aa|G|40
*
9QEG|1|Aa|C|411
9QEG|1|Aa|G|412
9QEG|1|Aa|U|413
9QEG|1|Aa|G|414
*
9QEG|1|Aa|C|444
9QEG|1|Aa|U|445
9QEG|1|Aa|G|446
9QEG|1|Aa|U|447
9QEG|1|Aa|U|448
9QEG|1|Aa|A|449
*
9QEG|1|Aa|U|501
9QEG|1|Aa|C|502
9QEG|1|Aa|A|503
9QEG|1|Aa|G|504
9QEG|1|Aa|A|505
9QEG|1|Aa|A|506
9QEG|1|Aa|A|507
9QEG|1|Aa|G|508
*
9QEG|1|Aa|C|553
9QEG|1|Aa|A|554
9QEG|1|Aa|A|555
9QEG|1|Aa|G|556

Current chains

Chain Aa

16S ribosomal RNA

Nearby chains

Chain Ad

Small ribosomal subunit protein uS4

Chain Al

Small ribosomal subunit protein uS12