J5_9QQB_004

3D structure

PDB id

9QQB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Quaternary complex of a translating ribosome, NAC, NMT1, and NatA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.43 Å

Loop

Sequence

GUCGCUC*GGG*UG*CCG*CGACC

Length

20 nucleotides

Bulged bases

9QQB|1|A2|G|126, 9QQB|1|A2|C|127

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QQB|1|A2|G|123
9QQB|1|A2|U|124
9QQB|1|A2|C|125
9QQB|1|A2|G|126
9QQB|1|A2|C|127
9QQB|1|A2|U|128
9QQB|1|A2|C|129
*
9QQB|1|A2|G|183
9QQB|1|A2|G|184
9QQB|1|A2|G|185
*
9QQB|1|A2|U|214
9QQB|1|A2|G|215
*
9QQB|1|A2|C|311
9QQB|1|A2|C|312
9QQB|1|A2|G|313
*
9QQB|1|A2|C|338
9QQB|1|A2|G|339
9QQB|1|A2|A|340
9QQB|1|A2|C|341
9QQB|1|A2|C|342

Current chains

Chain A2

18S rRNA

Nearby chains

Chain Ad

40S ribosomal protein S4

Chain Af

40S ribosomal protein S6

Chain Ah

40S ribosomal protein S8