J5_9RBF_004

3D structure

PDB id

9RBF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a stalled E. coli 70S RNC-NuoK-86 in complex with the membrane protein insertase SecYEG-YidC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.44 Å

Loop

Sequence

CGAUGAAG*CGAAUG*CA*UAU*AGG

Length

22 nucleotides

Bulged bases

9RBF|1|a|U|50

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RBF|1|a|C|47
9RBF|1|a|G|48
9RBF|1|a|A|49
9RBF|1|a|U|50
9RBF|1|a|G|51
9RBF|1|a|A|52
9RBF|1|a|A|53
9RBF|1|a|G|54
*
9RBF|1|a|C|116
9RBF|1|a|G|117
9RBF|1|a|A|118
9RBF|1|a|A|119
9RBF|1|a|U|120
9RBF|1|a|G|121
*
9RBF|1|a|C|130
9RBF|1|a|A|131
*
9RBF|1|a|U|148
9RBF|1|a|A|149
9RBF|1|a|U|150
*
9RBF|1|a|A|176
9RBF|1|a|G|177
9RBF|1|a|G|178

Current chains

Chain a

23S rRNA

Nearby chains

Chain 1

Large ribosomal subunit protein bL34