J5_9RPV_006
3D structure
- PDB id
- 9RPV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the ZAK-bound human disome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.35 Å
Loop
- Sequence
- GUG*CGAUGAAG*CGAACG*CG*UAC
- Length
- 22 nucleotides
- Bulged bases
- 9RPV|1|M8|U|38
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9RPV|1|M5|G|19
9RPV|1|M5|U|20
9RPV|1|M5|G|21
*
9RPV|1|M8|C|35
9RPV|1|M8|G|36
9RPV|1|M8|A|37
9RPV|1|M8|U|38
9RPV|1|M8|G|39
9RPV|1|M8|A|40
9RPV|1|M8|A|41
9RPV|1|M8|G|42
*
9RPV|1|M8|C|101
9RPV|1|M8|G|102
9RPV|1|M8|A|103
9RPV|1|M8|A|104
9RPV|1|M8|C|105
9RPV|1|M8|G|106
*
9RPV|1|M8|C|113
9RPV|1|M8|G|114
*
9RPV|1|M8|U|136
9RPV|1|M8|A|137
9RPV|1|M8|C|138
Current chains
- Chain M5
- 28S rRNA of the stalled 80S
- Chain M8
- 5.8S rRNA of the stalled 80S
Nearby chains
- Chain MN
- 60S ribosomal protein L15
- Chain MX
- 60S ribosomal protein L23a
- Chain Mh
- 60S ribosomal protein L35
- Chain Mj
- Large ribosomal subunit protein eL37
- Chain Ml
- 60S ribosomal protein L39
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