J5_9RTV_001

3D structure

PDB id

9RTV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S-EF-G(P610L)-GDP-Pi ribosome complex with tRNAs in hybrid state 2 (H2-EF-G(P610L)-GDP-Pi)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CGAUGAAG*CGAAUG*CA*UAU*AGG

Length

22 nucleotides

Bulged bases

9RTV|1|A|U|50

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9RTV|1|A|C|47
9RTV|1|A|G|48
9RTV|1|A|A|49
9RTV|1|A|U|50
9RTV|1|A|G|51
9RTV|1|A|A|52
9RTV|1|A|A|53
9RTV|1|A|G|54
*
9RTV|1|A|C|116
9RTV|1|A|G|117
9RTV|1|A|A|118
9RTV|1|A|A|119
9RTV|1|A|U|120
9RTV|1|A|G|121
*
9RTV|1|A|C|130
9RTV|1|A|A|131
*
9RTV|1|A|U|148
9RTV|1|A|A|149
9RTV|1|A|U|150
*
9RTV|1|A|A|176
9RTV|1|A|G|177
9RTV|1|A|G|178

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 2

Large ribosomal subunit protein bL34