J5_9RVC_001
3D structure
- PDB id
- 9RVC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- staphylococcus aureus 70S initiation complex with natural mRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CUGG*CGUG*CUGUUAU*AUCAGAAAGC*GCAAG
- Length
- 30 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9RVC|1|A|C|37
9RVC|1|A|U|38
9RVC|1|A|G|39
9RVC|1|A|G|40
*
9RVC|1|A|C|411
9RVC|1|A|G|412
9RVC|1|A|U|413
9RVC|1|A|G|414
*
9RVC|1|A|C|444
9RVC|1|A|U|445
9RVC|1|A|G|446
9RVC|1|A|U|447
9RVC|1|A|U|448
9RVC|1|A|A|449
9RVC|1|A|U|450
*
9RVC|1|A|A|500
9RVC|1|A|U|501
9RVC|1|A|C|502
9RVC|1|A|A|503
9RVC|1|A|G|504
9RVC|1|A|A|505
9RVC|1|A|A|506
9RVC|1|A|A|507
9RVC|1|A|G|508
9RVC|1|A|C|509
*
9RVC|1|A|G|552
9RVC|1|A|C|553
9RVC|1|A|A|554
9RVC|1|A|A|555
9RVC|1|A|G|556
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain D
- Small ribosomal subunit protein uS4
- Chain L
- Small ribosomal subunit protein uS12
Coloring options: