J5_9RVC_006
3D structure
- PDB id
- 9RVC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- staphylococcus aureus 70S initiation complex with natural mRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CGAGUU*AGAC*GUUC*GC*GAGAAUG
- Length
- 23 nucleotides
- Bulged bases
- 9RVC|1|a|U|1293
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9RVC|1|a|C|627
9RVC|1|a|G|628
9RVC|1|a|A|629
9RVC|1|a|G|630
9RVC|1|a|U|631
9RVC|1|a|U|632
*
9RVC|1|a|A|713
9RVC|1|a|G|714
9RVC|1|a|A|715
9RVC|1|a|C|716
*
9RVC|1|a|G|854
9RVC|1|a|U|855
9RVC|1|a|U|856
9RVC|1|a|C|857
*
9RVC|1|a|G|1234
9RVC|1|a|C|1235
*
9RVC|1|a|G|1288
9RVC|1|a|A|1289
9RVC|1|a|G|1290
9RVC|1|a|A|1291
9RVC|1|a|A|1292
9RVC|1|a|U|1293
9RVC|1|a|G|1294
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain 2
- Large ribosomal subunit protein bL35
- Chain e
- Large ribosomal subunit protein uL4
- Chain k
- Large ribosomal subunit protein uL15
- Chain p
- Large ribosomal subunit protein bL20
- Chain q
- Large ribosomal subunit protein bL21
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