J5_9T6M_004

3D structure

PDB id

9T6M (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome from delta-10 strain

Experimental method

ELECTRON MICROSCOPY

Resolution

1.87 Å

Loop

Sequence

CGAUGAAG*CGAAUG*CA*UAU*AGG

Length

22 nucleotides

Bulged bases

9T6M|1|a|U|50

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9T6M|1|a|C|47
9T6M|1|a|G|48
9T6M|1|a|A|49
9T6M|1|a|U|50
9T6M|1|a|G|51
9T6M|1|a|A|52
9T6M|1|a|A|53
9T6M|1|a|G|54
*
9T6M|1|a|C|116
9T6M|1|a|G|117
9T6M|1|a|A|118
9T6M|1|a|A|119
9T6M|1|a|U|120
9T6M|1|a|G|121
*
9T6M|1|a|C|130
9T6M|1|a|A|131
*
9T6M|1|a|U|148
9T6M|1|a|A|149
9T6M|1|a|U|150
*
9T6M|1|a|A|176
9T6M|1|a|G|177
9T6M|1|a|G|178

Current chains

Chain a

23S rRNA

Nearby chains

Chain 1

Large ribosomal subunit protein bL34