J5_9TNL_004

3D structure

PDB id

9TNL (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with A/P- and P/E-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.11 Å

Loop

Sequence

CGAUGAAG*CGAAUG*CA*UAU*AGG

Length

22 nucleotides

Bulged bases

9TNL|1|a|U|50

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9TNL|1|a|C|47
9TNL|1|a|G|48
9TNL|1|a|A|49
9TNL|1|a|U|50
9TNL|1|a|G|51
9TNL|1|a|A|52
9TNL|1|a|A|53
9TNL|1|a|G|54
*
9TNL|1|a|C|116
9TNL|1|a|G|117
9TNL|1|a|A|118
9TNL|1|a|A|119
9TNL|1|a|U|120
9TNL|1|a|G|121
*
9TNL|1|a|C|130
9TNL|1|a|A|131
*
9TNL|1|a|U|148
9TNL|1|a|A|149
9TNL|1|a|U|150
*
9TNL|1|a|A|176
9TNL|1|a|G|177
9TNL|1|a|G|178

Current chains

Chain a

23S rRNA

Nearby chains

Chain 1

Large ribosomal subunit protein bL34