J5_9TQA_004

3D structure

PDB id

9TQA (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome, trapped conformational ground state of SSU-h44 apical loop, with A- and P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.06 Å

Loop

Sequence

CGAUGAAG*CGAAUG*CA*UAU*AGG

Length

22 nucleotides

Bulged bases

9TQA|1|a|U|50

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9TQA|1|a|C|47
9TQA|1|a|G|48
9TQA|1|a|A|49
9TQA|1|a|U|50
9TQA|1|a|G|51
9TQA|1|a|A|52
9TQA|1|a|A|53
9TQA|1|a|G|54
*
9TQA|1|a|C|116
9TQA|1|a|G|117
9TQA|1|a|A|118
9TQA|1|a|A|119
9TQA|1|a|U|120
9TQA|1|a|G|121
*
9TQA|1|a|C|130
9TQA|1|a|A|131
*
9TQA|1|a|U|148
9TQA|1|a|A|149
9TQA|1|a|U|150
*
9TQA|1|a|A|176
9TQA|1|a|G|177
9TQA|1|a|G|178

Current chains

Chain a

23S rRNA

Nearby chains

Chain 1

Large ribosomal subunit protein bL34