J5_9WW5_007
3D structure
- PDB id
- 9WW5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- human 80S ribosome rotated state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.69 Å
Loop
- Sequence
- CUUG(PSU)C(PSU)*AAAAAUAAC*GGAAUGAG*CGAGG(A2M)UCCAUU*AAUA(OMG)
- Length
- 41 nucleotides
- Bulged bases
- 9WW5|1|BA|G|589
- QA status
- Modified nucleotides: PSU, A2M, OMG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9WW5|1|BA|C|30
9WW5|1|BA|U|31
9WW5|1|BA|U|32
9WW5|1|BA|G|33
9WW5|1|BA|PSU|34
9WW5|1|BA|C|35
9WW5|1|BA|PSU|36
*
9WW5|1|BA|A|519
9WW5|1|BA|A|520
9WW5|1|BA|A|521
9WW5|1|BA|A|522
9WW5|1|BA|A|523
9WW5|1|BA|U|524
9WW5|1|BA|A|525
9WW5|1|BA|A|526
9WW5|1|BA|C|527
*
9WW5|1|BA|G|558
9WW5|1|BA|G|559
9WW5|1|BA|A|560
9WW5|1|BA|A|561
9WW5|1|BA|U|562
9WW5|1|BA|G|563
9WW5|1|BA|A|564
9WW5|1|BA|G|565
*
9WW5|1|BA|C|585
9WW5|1|BA|G|586
9WW5|1|BA|A|587
9WW5|1|BA|G|588
9WW5|1|BA|G|589
9WW5|1|BA|A2M|590
9WW5|1|BA|U|591
9WW5|1|BA|C|592
9WW5|1|BA|C|593
9WW5|1|BA|A|594
9WW5|1|BA|U|595
9WW5|1|BA|U|596
*
9WW5|1|BA|A|640
9WW5|1|BA|A|641
9WW5|1|BA|U|642
9WW5|1|BA|A|643
9WW5|1|BA|OMG|644
Current chains
- Chain BA
- 18S rRNA (1740-MER)
Nearby chains
- Chain BQ
- 40S ribosomal protein S23
- Chain BX
- 40S ribosomal protein S9
- Chain Bf
- Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein
Coloring options: