J5_9Y4G_011
3D structure
- PDB id
- 9Y4G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of tuco-tuco ribosome (rotated, tRNAs, and mRNA)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- AUCUUGG*CCCUUG*CGUU*AUGGAAUAG*CAUGAU
- Length
- 32 nucleotides
- Bulged bases
- 9Y4G|1|B2|C|687, 9Y4G|1|B2|U|743, 9Y4G|1|B2|G|798, 9Y4G|1|B2|U|871, 9Y4G|1|B2|A|913
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9Y4G|1|B2|A|685
9Y4G|1|B2|U|686
9Y4G|1|B2|C|687
9Y4G|1|B2|U|688
9Y4G|1|B2|U|689
9Y4G|1|B2|G|690
9Y4G|1|B2|G|691
*
9Y4G|1|B2|C|739
9Y4G|1|B2|C|740
9Y4G|1|B2|C|741
9Y4G|1|B2|U|742
9Y4G|1|B2|U|743
9Y4G|1|B2|G|744
*
9Y4G|1|B2|C|797
9Y4G|1|B2|G|798
9Y4G|1|B2|U|799
9Y4G|1|B2|U|800
*
9Y4G|1|B2|A|865
9Y4G|1|B2|U|866
9Y4G|1|B2|G|867
9Y4G|1|B2|G|868
9Y4G|1|B2|A|869
9Y4G|1|B2|A|870
9Y4G|1|B2|U|871
9Y4G|1|B2|A|872
9Y4G|1|B2|G|873
*
9Y4G|1|B2|C|912
9Y4G|1|B2|A|913
9Y4G|1|B2|U|914
9Y4G|1|B2|G|915
9Y4G|1|B2|A|916
9Y4G|1|B2|U|917
Current chains
- Chain B2
- 18S ribosomal RNA
Nearby chains
- Chain AH
- 40S ribosomal protein S7
- Chain AL
- 40S ribosomal protein S11
- Chain AN
- 40S ribosomal protein S13
- Chain AW
- 40S ribosomal protein S15a
- Chain AX
- 40S ribosomal protein S23
- Chain CR
- 60S ribosomal protein L19
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