J6_1J5A_001

3D structure

PDB id

1J5A (explore in PDB, NAKB, or RNA 3D Hub)

Description

STRUCTURAL BASIS FOR THE INTERACTION OF ANTIBIOTICS WITH THE PEPTIDYL TRANSFERASE CENTER IN EUBACTERIA

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

GC*GGAAC*GGAGAAGAAAG*CGAUU*AUCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

1J5A|1|A|A|200

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1J5A|1|A|G|44
1J5A|1|A|C|45
*
1J5A|1|A|G|156
1J5A|1|A|G|157
1J5A|1|A|A|158
1J5A|1|A|A|159
1J5A|1|A|C|160
*
1J5A|1|A|G|191
1J5A|1|A|G|192
1J5A|1|A|A|193
1J5A|1|A|G|194
1J5A|1|A|A|195
1J5A|1|A|A|196
1J5A|1|A|G|197
1J5A|1|A|A|198
1J5A|1|A|A|199
1J5A|1|A|A|200
1J5A|1|A|G|201
*
1J5A|1|A|C|208
1J5A|1|A|G|209
1J5A|1|A|A|210
1J5A|1|A|U|211
1J5A|1|A|U|212
*
1J5A|1|A|A|239
1J5A|1|A|U|240
1J5A|1|A|C|241
1J5A|1|A|A|242
1J5A|1|A|G|243
*
1J5A|1|A|C|439
1J5A|1|A|U|440
1J5A|1|A|A|441
1J5A|1|A|A|442
1J5A|1|A|A|443
1J5A|1|A|U|444
1J5A|1|A|A|445
1J5A|1|A|C|446

Current chains

Chain A

23S RRNA

Nearby chains