J6_1NWY_003
3D structure
- PDB id
- 1NWY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- COMPLEX OF THE LARGE RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS WITH AZITHROMYCIN
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- UUUA*UUUG*CG*CGCC*GCUUAGUGAACC*GAUCAACGGAUAAAA
- Length
- 41 nucleotides
- Bulged bases
- 1NWY|1|0|U|2059, 1NWY|1|0|A|2405, 1NWY|1|0|G|2407, 1NWY|1|0|A|2409, 1NWY|1|0|U|2410
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
1NWY|1|0|U|2057
1NWY|1|0|U|2058
1NWY|1|0|U|2059
1NWY|1|0|A|2060
*
1NWY|1|0|U|2222
1NWY|1|0|U|2223
1NWY|1|0|U|2224
1NWY|1|0|G|2225
*
1NWY|1|0|C|2237
1NWY|1|0|G|2238
*
1NWY|1|0|C|2260
1NWY|1|0|G|2261
1NWY|1|0|C|2262
1NWY|1|0|C|2263
*
1NWY|1|0|G|2363
1NWY|1|0|C|2364
1NWY|1|0|U|2365
1NWY|1|0|U|2366
1NWY|1|0|A|2367
1NWY|1|0|G|2368
1NWY|1|0|U|2369
1NWY|1|0|G|2370
1NWY|1|0|A|2371
1NWY|1|0|A|2372
1NWY|1|0|C|2373
1NWY|1|0|C|2374
*
1NWY|1|0|G|2400
1NWY|1|0|A|2401
1NWY|1|0|U|2402
1NWY|1|0|C|2403
1NWY|1|0|A|2404
1NWY|1|0|A|2405
1NWY|1|0|C|2406
1NWY|1|0|G|2407
1NWY|1|0|G|2408
1NWY|1|0|A|2409
1NWY|1|0|U|2410
1NWY|1|0|A|2411
1NWY|1|0|A|2412
1NWY|1|0|A|2413
1NWY|1|0|A|2414
Current chains
- Chain 0
- 23S RIBOSOMAL RRNA
Nearby chains
- Chain 1
- ribosomal protein L33
- Chain 3
- ribosomal protein L35
- Chain A
- ribosomal protein L2
- Chain J
- ribosomal protein L15
- Chain U
- ribosomal protein L27
- Chain Y
- ribosomal protein L31
Coloring options: