J6_23WI_002

3D structure

PDB id

23WI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Subtomogram average of 70S ribosome (11x11) using CRYO ARM 300II

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

23WI|1|A|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

23WI|1|A|G|45
23WI|1|A|G|46
*
23WI|1|A|C|179
23WI|1|A|G|180
23WI|1|A|A|181
23WI|1|A|A|182
23WI|1|A|C|183
*
23WI|1|A|G|214
23WI|1|A|G|215
23WI|1|A|A|216
23WI|1|A|A|217
23WI|1|A|A|218
23WI|1|A|A|219
23WI|1|A|G|220
23WI|1|A|A|221
23WI|1|A|A|222
23WI|1|A|A|223
23WI|1|A|U|224
*
23WI|1|A|A|231
23WI|1|A|G|232
23WI|1|A|A|233
23WI|1|A|U|234
23WI|1|A|U|235
*
23WI|1|A|A|262
23WI|1|A|G|263
23WI|1|A|C|264
23WI|1|A|A|265
23WI|1|A|G|266
*
23WI|1|A|C|426
23WI|1|A|U|427
23WI|1|A|A|428
23WI|1|A|A|429
23WI|1|A|A|430
23WI|1|A|U|431
23WI|1|A|A|432
23WI|1|A|C|433

Current chains

Chain A

16S rRNA

Nearby chains

Chain 2

50S ribosomal protein L34