J6_28LN_002
3D structure
- PDB id
- 28LN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- XBP1u-stalled RPL4 RNC in complex with NAC
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- CGAG*CGCAA*UGAAG*CGAG*CGG*CACGAG
- Length
- 27 nucleotides
- Bulged bases
- 28LN|1|B5|C|1500, 28LN|1|B5|G|1501
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
28LN|1|B5|C|1351
28LN|1|B5|G|1352
28LN|1|B5|A|1353
28LN|1|B5|G|1354
*
28LN|1|B5|C|1383
28LN|1|B5|G|1384
28LN|1|B5|C|1385
28LN|1|B5|A|1386
28LN|1|B5|A|1387
*
28LN|1|B5|U|1394
28LN|1|B5|G|1395
28LN|1|B5|A|1396
28LN|1|B5|A|1397
28LN|1|B5|G|1398
*
28LN|1|B5|C|1417
28LN|1|B5|G|1418
28LN|1|B5|A|1419
28LN|1|B5|G|1420
*
28LN|1|B5|C|1463
28LN|1|B5|G|1464
28LN|1|B5|G|1465
*
28LN|1|B5|C|1498
28LN|1|B5|A|1499
28LN|1|B5|C|1500
28LN|1|B5|G|1501
28LN|1|B5|A|1502
28LN|1|B5|G|1503
Current chains
- Chain B5
- 28S rRNA
Nearby chains
- Chain BC
- 60S ribosomal protein L4
- Chain BL
- 60S ribosomal protein L13
- Chain BQ
- 60S ribosomal protein L18
- Chain Ba
- Large ribosomal subunit protein uL15
- Chain Bb
- Large ribosomal subunit protein eL29
- Chain Bi
- 60S ribosomal protein L36
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