J6_3BBX_001

3D structure

PDB id

3BBX (explore in PDB, NAKB, or RNA 3D Hub)

Description

The Hsp15 protein fitted into the low resolution Cryo-EM map of the 50S.nc-tRNA.Hsp15 complex

Experimental method

ELECTRON MICROSCOPY

Resolution

10 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

3BBX|1|B|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3BBX|1|B|G|45
3BBX|1|B|G|46
*
3BBX|1|B|C|179
3BBX|1|B|G|180
3BBX|1|B|A|181
3BBX|1|B|A|182
3BBX|1|B|C|183
*
3BBX|1|B|G|214
3BBX|1|B|G|215
3BBX|1|B|A|216
3BBX|1|B|A|217
3BBX|1|B|A|218
3BBX|1|B|A|219
3BBX|1|B|G|220
3BBX|1|B|A|221
3BBX|1|B|A|222
3BBX|1|B|A|223
3BBX|1|B|U|224
*
3BBX|1|B|A|231
3BBX|1|B|G|232
3BBX|1|B|A|233
3BBX|1|B|U|234
3BBX|1|B|U|235
*
3BBX|1|B|A|262
3BBX|1|B|G|263
3BBX|1|B|C|264
3BBX|1|B|A|265
3BBX|1|B|G|266
*
3BBX|1|B|C|426
3BBX|1|B|U|427
3BBX|1|B|A|428
3BBX|1|B|A|429
3BBX|1|B|A|430
3BBX|1|B|U|431
3BBX|1|B|A|432
3BBX|1|B|C|433

Current chains

Chain B

23S ribosomal RNA

Nearby chains

Chain 2

50S ribosomal protein L34