J6_3BBX_002
3D structure
- PDB id
- 3BBX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The Hsp15 protein fitted into the low resolution Cryo-EM map of the 50S.nc-tRNA.Hsp15 complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 10 Å
Loop
- Sequence
- UUUA*UUUG*CU*AGCA*UCAUAGUGAUCC*GCUCAACGGAUAAAA
- Length
- 41 nucleotides
- Bulged bases
- 3BBX|1|B|U|2076, 3BBX|1|B|U|2390, 3BBX|1|B|G|2428, 3BBX|1|B|A|2430, 3BBX|1|B|U|2431
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3BBX|1|B|U|2074
3BBX|1|B|U|2075
3BBX|1|B|U|2076
3BBX|1|B|A|2077
*
3BBX|1|B|U|2243
3BBX|1|B|U|2244
3BBX|1|B|U|2245
3BBX|1|B|G|2246
*
3BBX|1|B|C|2258
3BBX|1|B|U|2259
*
3BBX|1|B|A|2281
3BBX|1|B|G|2282
3BBX|1|B|C|2283
3BBX|1|B|A|2284
*
3BBX|1|B|U|2384
3BBX|1|B|C|2385
3BBX|1|B|A|2386
3BBX|1|B|U|2387
3BBX|1|B|A|2388
3BBX|1|B|G|2389
3BBX|1|B|U|2390
3BBX|1|B|G|2391
3BBX|1|B|A|2392
3BBX|1|B|U|2393
3BBX|1|B|C|2394
3BBX|1|B|C|2395
*
3BBX|1|B|G|2421
3BBX|1|B|C|2422
3BBX|1|B|U|2423
3BBX|1|B|C|2424
3BBX|1|B|A|2425
3BBX|1|B|A|2426
3BBX|1|B|C|2427
3BBX|1|B|G|2428
3BBX|1|B|G|2429
3BBX|1|B|A|2430
3BBX|1|B|U|2431
3BBX|1|B|A|2432
3BBX|1|B|A|2433
3BBX|1|B|A|2434
3BBX|1|B|A|2435
Current chains
- Chain B
- 23S ribosomal RNA
Nearby chains
- Chain 1
- 50S ribosomal protein L33
- Chain 3
- 50S ribosomal protein L35
- Chain L
- 50S ribosomal protein L15
- Chain W
- 50S ribosomal protein L27
- Chain Z
- 50S ribosomal protein L31
Coloring options: