J6_3DHS_001

3D structure

PDB id

3DHS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mapping metal-binding sites in the catalytic domain of bacterial RNase P RNA

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

CGC*GAGGAAAGUCCAUGC*GAAAC*GGCAC*GA*UAGAUAGAUG

Length

40 nucleotides

Bulged bases

3DHS|1|A|U|52, 3DHS|1|A|A|256, 3DHS|1|A|A|334, 3DHS|1|A|G|335

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3DHS|1|A|C|21
3DHS|1|A|G|22
3DHS|1|A|C|23
*
3DHS|1|A|G|44
3DHS|1|A|A|45
3DHS|1|A|G|46
3DHS|1|A|G|47
3DHS|1|A|A|48
3DHS|1|A|A|49
3DHS|1|A|A|50
3DHS|1|A|G|51
3DHS|1|A|U|52
3DHS|1|A|C|53
3DHS|1|A|C|54
3DHS|1|A|A|55
3DHS|1|A|U|56
3DHS|1|A|G|57
3DHS|1|A|C|58
*
3DHS|1|A|G|254
3DHS|1|A|A|255
3DHS|1|A|A|256
3DHS|1|A|A|257
3DHS|1|A|C|258
*
3DHS|1|A|G|274
3DHS|1|A|G|275
3DHS|1|A|C|276
3DHS|1|A|A|277
3DHS|1|A|C|278
*
3DHS|1|A|G|307
3DHS|1|A|A|308
*
3DHS|1|A|U|329
3DHS|1|A|A|330
3DHS|1|A|G|331
3DHS|1|A|A|332
3DHS|1|A|U|333
3DHS|1|A|A|334
3DHS|1|A|G|335
3DHS|1|A|A|336
3DHS|1|A|U|337
3DHS|1|A|G|338

Current chains

Chain A

RNase P RNA

Nearby chains