J6_3J9M_001
3D structure
- PDB id
- 3J9M (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the human mitochondrial ribosome (class 1)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- AGAUAG*CAA*UUAG*CACUA*UUGUAG*CACACCCAAU
- Length
- 34 nucleotides
- Bulged bases
- 3J9M|1|A|A|2097, 3J9M|1|A|G|2140, 3J9M|1|A|U|2141, 3J9M|1|A|A|2142, 3J9M|1|A|C|2262
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3J9M|1|A|A|2027
3J9M|1|A|G|2028
3J9M|1|A|A|2029
3J9M|1|A|U|2030
3J9M|1|A|A|2031
3J9M|1|A|G|2032
*
3J9M|1|A|C|2043
3J9M|1|A|A|2044
3J9M|1|A|A|2045
*
3J9M|1|A|U|2095
3J9M|1|A|U|2096
3J9M|1|A|A|2097
3J9M|1|A|G|2098
*
3J9M|1|A|C|2123
3J9M|1|A|A|2124
3J9M|1|A|C|2125
3J9M|1|A|U|2126
3J9M|1|A|A|2127
*
3J9M|1|A|U|2138
3J9M|1|A|U|2139
3J9M|1|A|G|2140
3J9M|1|A|U|2141
3J9M|1|A|A|2142
3J9M|1|A|G|2143
*
3J9M|1|A|C|2257
3J9M|1|A|A|2258
3J9M|1|A|C|2259
3J9M|1|A|A|2260
3J9M|1|A|C|2261
3J9M|1|A|C|2262
3J9M|1|A|C|2263
3J9M|1|A|A|2264
3J9M|1|A|A|2265
3J9M|1|A|U|2266
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain 3
- bL35m
- Chain I
- uL10m
- Chain M
- uL15m
- Chain N
- uL16m
- Chain R
- bL20m
- Chain S
- bL21m
- Chain W
- bL27m
- Chain Z
- uL30m
- Chain i
- mL51
- Chain j
- mL52
- Chain o
- mL63
Coloring options: