J6_3J9Z_001

3D structure

PDB id

3J9Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

3J9Z|1|LA|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J9Z|1|LA|G|45
3J9Z|1|LA|G|46
*
3J9Z|1|LA|C|179
3J9Z|1|LA|G|180
3J9Z|1|LA|A|181
3J9Z|1|LA|A|182
3J9Z|1|LA|C|183
*
3J9Z|1|LA|G|214
3J9Z|1|LA|G|215
3J9Z|1|LA|A|216
3J9Z|1|LA|A|217
3J9Z|1|LA|A|218
3J9Z|1|LA|A|219
3J9Z|1|LA|G|220
3J9Z|1|LA|A|221
3J9Z|1|LA|A|222
3J9Z|1|LA|A|223
3J9Z|1|LA|U|224
*
3J9Z|1|LA|A|231
3J9Z|1|LA|G|232
3J9Z|1|LA|A|233
3J9Z|1|LA|U|234
3J9Z|1|LA|U|235
*
3J9Z|1|LA|A|262
3J9Z|1|LA|G|263
3J9Z|1|LA|C|264
3J9Z|1|LA|A|265
3J9Z|1|LA|G|266
*
3J9Z|1|LA|C|426
3J9Z|1|LA|U|427
3J9Z|1|LA|A|428
3J9Z|1|LA|A|429
3J9Z|1|LA|A|430
3J9Z|1|LA|U|431
3J9Z|1|LA|A|432
3J9Z|1|LA|C|433

Current chains

Chain LA

23S ribosomal RNA

Nearby chains

Chain L3

50S ribosomal protein L34