J6_3JA1_001

3D structure

PDB id

3JA1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

3JA1|1|LA|A|223

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JA1|1|LA|G|45
3JA1|1|LA|G|46
*
3JA1|1|LA|C|179
3JA1|1|LA|G|180
3JA1|1|LA|A|181
3JA1|1|LA|A|182
3JA1|1|LA|C|183
*
3JA1|1|LA|G|214
3JA1|1|LA|G|215
3JA1|1|LA|A|216
3JA1|1|LA|A|217
3JA1|1|LA|A|218
3JA1|1|LA|A|219
3JA1|1|LA|G|220
3JA1|1|LA|A|221
3JA1|1|LA|A|222
3JA1|1|LA|A|223
3JA1|1|LA|U|224
*
3JA1|1|LA|A|231
3JA1|1|LA|G|232
3JA1|1|LA|A|233
3JA1|1|LA|U|234
3JA1|1|LA|U|235
*
3JA1|1|LA|A|262
3JA1|1|LA|G|263
3JA1|1|LA|C|264
3JA1|1|LA|A|265
3JA1|1|LA|G|266
*
3JA1|1|LA|C|426
3JA1|1|LA|U|427
3JA1|1|LA|A|428
3JA1|1|LA|A|429
3JA1|1|LA|A|430
3JA1|1|LA|U|431
3JA1|1|LA|A|432
3JA1|1|LA|C|433

Current chains

Chain LA

23S ribosomal RNA

Nearby chains

Chain L5

50S ribosomal protein L34