J6_3JBP_001
3D structure
- PDB id
- 3JBP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-electron microscopy reconstruction of the Plasmodium falciparum 80S ribosome bound to E-tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.7 Å
Loop
- Sequence
- CAAAUC*GAAGAAAAGAAAA*UGAUU*ACCAG*CUAAAUAUAU*AG
- Length
- 41 nucleotides
- Bulged bases
- 3JBP|1|AA|A|67, 3JBP|1|AA|A|337
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3JBP|1|AA|C|23
3JBP|1|AA|A|24
3JBP|1|AA|A|25
3JBP|1|AA|A|26
3JBP|1|AA|U|27
3JBP|1|AA|C|28
*
3JBP|1|AA|G|56
3JBP|1|AA|A|57
3JBP|1|AA|A|58
3JBP|1|AA|G|59
3JBP|1|AA|A|60
3JBP|1|AA|A|61
3JBP|1|AA|A|62
3JBP|1|AA|A|63
3JBP|1|AA|G|64
3JBP|1|AA|A|65
3JBP|1|AA|A|66
3JBP|1|AA|A|67
3JBP|1|AA|A|68
*
3JBP|1|AA|U|75
3JBP|1|AA|G|76
3JBP|1|AA|A|77
3JBP|1|AA|U|78
3JBP|1|AA|U|79
*
3JBP|1|AA|A|106
3JBP|1|AA|C|107
3JBP|1|AA|C|108
3JBP|1|AA|A|109
3JBP|1|AA|G|110
*
3JBP|1|AA|C|329
3JBP|1|AA|U|330
3JBP|1|AA|A|331
3JBP|1|AA|A|332
3JBP|1|AA|A|333
3JBP|1|AA|U|334
3JBP|1|AA|A|335
3JBP|1|AA|U|336
3JBP|1|AA|A|337
3JBP|1|AA|U|338
*
3JBP|1|AC|A|37
3JBP|1|AC|G|38
Current chains
- Chain AA
- 28S ribosomal RNA
- Chain AC
- 5.8S ribosomal RNA
Nearby chains
- Chain A3
- 60S ribosomal protein uL29
- Chain AF
- 60S ribosomal protein uL4
- Chain AL
- 60S ribosomal protein eL13
- Chain AP
- 60S ribosomal protein eL15
- Chain Ab
- 60S ribosomal protein eL36
- Chain Ac
- 60S ribosomal protein eL37
Coloring options: