J6_3JBV_002
3D structure
- PDB id
- 3JBV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.32 Å
Loop
- Sequence
- UGCAACUG*CACAG*UGACGCCUG*CG*CCUAAGGUAG*CGAAUGGCGUAAUGAUG
- Length
- 51 nucleotides
- Bulged bases
- 3JBV|1|b|U|1971, 3JBV|1|b|A|1981
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3JBV|1|b|U|1769
3JBV|1|b|G|1770
3JBV|1|b|C|1771
3JBV|1|b|A|1772
3JBV|1|b|A|1773
3JBV|1|b|C|1774
3JBV|1|b|U|1775
3JBV|1|b|G|1776
*
3JBV|1|b|C|1788
3JBV|1|b|A|1789
3JBV|1|b|C|1790
3JBV|1|b|A|1791
3JBV|1|b|G|1792
*
3JBV|1|b|U|1827
3JBV|1|b|G|1828
3JBV|1|b|A|1829
3JBV|1|b|C|1830
3JBV|1|b|G|1831
3JBV|1|b|C|1832
3JBV|1|b|C|1833
3JBV|1|b|U|1834
3JBV|1|b|G|1835
*
3JBV|1|b|C|1905
3JBV|1|b|G|1906
*
3JBV|1|b|C|1924
3JBV|1|b|C|1925
3JBV|1|b|U|1926
3JBV|1|b|A|1927
3JBV|1|b|A|1928
3JBV|1|b|G|1929
3JBV|1|b|G|1930
3JBV|1|b|U|1931
3JBV|1|b|A|1932
3JBV|1|b|G|1933
*
3JBV|1|b|C|1967
3JBV|1|b|G|1968
3JBV|1|b|A|1969
3JBV|1|b|A|1970
3JBV|1|b|U|1971
3JBV|1|b|G|1972
3JBV|1|b|G|1973
3JBV|1|b|C|1974
3JBV|1|b|G|1975
3JBV|1|b|U|1976
3JBV|1|b|A|1977
3JBV|1|b|A|1978
3JBV|1|b|U|1979
3JBV|1|b|G|1980
3JBV|1|b|A|1981
3JBV|1|b|U|1982
3JBV|1|b|G|1983
Current chains
- Chain b
- RNA (2903-MER)
Nearby chains
- Chain A
- Small subunit ribosomal RNA; SSU rRNA
- Chain W
- Transfer RNA; tRNA
- Chain c
- 50S ribosomal protein L2
Coloring options: