J6_3JCE_001

3D structure

PDB id

3JCE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GG*CGAACC*GAGGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

39 nucleotides

Bulged bases

3JCE|1|A|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JCE|1|A|G|45
3JCE|1|A|G|46
*
3JCE|1|A|C|179
3JCE|1|A|G|180
3JCE|1|A|A|181
3JCE|1|A|A|182
3JCE|1|A|C|183
3JCE|1|A|C|184
*
3JCE|1|A|G|212
3JCE|1|A|A|213
3JCE|1|A|G|214
3JCE|1|A|G|215
3JCE|1|A|A|216
3JCE|1|A|A|217
3JCE|1|A|A|218
3JCE|1|A|A|219
3JCE|1|A|G|220
3JCE|1|A|A|221
3JCE|1|A|A|222
3JCE|1|A|A|223
3JCE|1|A|U|224
*
3JCE|1|A|A|231
3JCE|1|A|G|232
3JCE|1|A|A|233
3JCE|1|A|U|234
3JCE|1|A|U|235
*
3JCE|1|A|A|262
3JCE|1|A|G|263
3JCE|1|A|C|264
3JCE|1|A|A|265
3JCE|1|A|G|266
*
3JCE|1|A|C|426
3JCE|1|A|U|427
3JCE|1|A|A|428
3JCE|1|A|A|429
3JCE|1|A|A|430
3JCE|1|A|U|431
3JCE|1|A|A|432
3JCE|1|A|C|433

Current chains

Chain A

23 ribosomal RNA

Nearby chains

Chain 2

50S ribosomal protein L34