J6_3JCN_001

3D structure

PDB id

3JCN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structures of ribosome-bound initiation factor 2 reveal the mechanism of subunit association: Initiation Complex I

Experimental method

ELECTRON MICROSCOPY

Resolution

4.6 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

3JCN|1|A|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3JCN|1|A|G|45
3JCN|1|A|G|46
*
3JCN|1|A|C|179
3JCN|1|A|G|180
3JCN|1|A|A|181
3JCN|1|A|A|182
3JCN|1|A|C|183
*
3JCN|1|A|G|214
3JCN|1|A|G|215
3JCN|1|A|A|216
3JCN|1|A|A|217
3JCN|1|A|A|218
3JCN|1|A|A|219
3JCN|1|A|G|220
3JCN|1|A|A|221
3JCN|1|A|A|222
3JCN|1|A|A|223
3JCN|1|A|U|224
*
3JCN|1|A|A|231
3JCN|1|A|G|232
3JCN|1|A|A|233
3JCN|1|A|U|234
3JCN|1|A|U|235
*
3JCN|1|A|A|262
3JCN|1|A|G|263
3JCN|1|A|C|264
3JCN|1|A|A|265
3JCN|1|A|G|266
*
3JCN|1|A|C|426
3JCN|1|A|U|427
3JCN|1|A|A|428
3JCN|1|A|A|429
3JCN|1|A|A|430
3JCN|1|A|U|431
3JCN|1|A|A|432
3JCN|1|A|C|433

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 2

50S ribosomal protein L34