J6_4CSU_001

3D structure

PDB id

4CSU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structures of the 50S ribosome subunit bound with ObgE

Experimental method

ELECTRON MICROSCOPY

Resolution

5.5 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

4CSU|1|B|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4CSU|1|B|G|45
4CSU|1|B|G|46
*
4CSU|1|B|C|179
4CSU|1|B|G|180
4CSU|1|B|A|181
4CSU|1|B|A|182
4CSU|1|B|C|183
*
4CSU|1|B|G|214
4CSU|1|B|G|215
4CSU|1|B|A|216
4CSU|1|B|A|217
4CSU|1|B|A|218
4CSU|1|B|A|219
4CSU|1|B|G|220
4CSU|1|B|A|221
4CSU|1|B|A|222
4CSU|1|B|A|223
4CSU|1|B|U|224
*
4CSU|1|B|A|231
4CSU|1|B|G|232
4CSU|1|B|A|233
4CSU|1|B|U|234
4CSU|1|B|U|235
*
4CSU|1|B|A|262
4CSU|1|B|G|263
4CSU|1|B|C|264
4CSU|1|B|A|265
4CSU|1|B|G|266
*
4CSU|1|B|C|426
4CSU|1|B|U|427
4CSU|1|B|A|428
4CSU|1|B|A|429
4CSU|1|B|A|430
4CSU|1|B|U|431
4CSU|1|B|A|432
4CSU|1|B|C|433

Current chains

Chain B

23S RRNA

Nearby chains

Chain 6

50S RIBOSOMAL PROTEIN L34