3D structure

PDB id
4TUB (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of tRNA-Thr bound to Codon ACC-C on the Ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3.6 Å

Loop

Sequence
GC*GGAAC*GGAGAGGAAAG*CGACU*ACCAG*CUAAGUAC
Length
36 nucleotides
Bulged bases
4TUB|1|RA|A|212
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4TUB|1|RA|G|44
4TUB|1|RA|C|45
*
4TUB|1|RA|G|168
4TUB|1|RA|G|169
4TUB|1|RA|A|170
4TUB|1|RA|A|171
4TUB|1|RA|C|172
*
4TUB|1|RA|G|203
4TUB|1|RA|G|204
4TUB|1|RA|A|205
4TUB|1|RA|G|206
4TUB|1|RA|A|207
4TUB|1|RA|G|208
4TUB|1|RA|G|209
4TUB|1|RA|A|210
4TUB|1|RA|A|211
4TUB|1|RA|A|212
4TUB|1|RA|G|213
*
4TUB|1|RA|C|220
4TUB|1|RA|G|221
4TUB|1|RA|A|222
4TUB|1|RA|C|223
4TUB|1|RA|U|224
*
4TUB|1|RA|A|251
4TUB|1|RA|C|252
4TUB|1|RA|C|253
4TUB|1|RA|A|254
4TUB|1|RA|G|255
*
4TUB|1|RA|C|453
4TUB|1|RA|U|454
4TUB|1|RA|A|455
4TUB|1|RA|A|456
4TUB|1|RA|G|457
4TUB|1|RA|U|458
4TUB|1|RA|A|459
4TUB|1|RA|C|460

Current chains

Chain RA
23S rRNA

Nearby chains

Chain R7
50S ribosomal protein L34

Coloring options:

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