J6_4UG0_001
3D structure
- PDB id
- 4UG0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- STRUCTURE OF THE HUMAN 80S RIBOSOME
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GGCGAC*GGAGAAGAAAC*GGAUU*AAGAG*CUAAAUAC*GUC
- Length
- 38 nucleotides
- Bulged bases
- 4UG0|1|L5|A|66, 4UG0|1|L8|U|34
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4UG0|1|L5|G|21
4UG0|1|L5|G|22
4UG0|1|L5|C|23
4UG0|1|L5|G|24
4UG0|1|L5|A|25
4UG0|1|L5|C|26
*
4UG0|1|L5|G|57
4UG0|1|L5|G|58
4UG0|1|L5|A|59
4UG0|1|L5|G|60
4UG0|1|L5|A|61
4UG0|1|L5|A|62
4UG0|1|L5|G|63
4UG0|1|L5|A|64
4UG0|1|L5|A|65
4UG0|1|L5|A|66
4UG0|1|L5|C|67
*
4UG0|1|L5|G|74
4UG0|1|L5|G|75
4UG0|1|L5|A|76
4UG0|1|L5|U|77
4UG0|1|L5|U|78
*
4UG0|1|L5|A|105
4UG0|1|L5|A|106
4UG0|1|L5|G|107
4UG0|1|L5|A|108
4UG0|1|L5|G|109
*
4UG0|1|L5|C|332
4UG0|1|L5|U|333
4UG0|1|L5|A|334
4UG0|1|L5|A|335
4UG0|1|L5|A|336
4UG0|1|L5|U|337
4UG0|1|L5|A|338
4UG0|1|L5|C|339
*
4UG0|1|L8|G|33
4UG0|1|L8|U|34
4UG0|1|L8|C|35
Current chains
- Chain L5
- 28S ribosomal RNA
- Chain L8
- 5.8S ribosomal RNA
Nearby chains
- Chain LL
- 60S RIBOSOMAL PROTEIN L13
- Chain LN
- 60S RIBOSOMAL PROTEIN L15
- Chain Lh
- 60S RIBOSOMAL PROTEIN L35
- Chain Li
- 60S RIBOSOMAL PROTEIN L36
- Chain Lj
- 60S RIBOSOMAL PROTEIN L37
Coloring options: