J6_4UJE_008
3D structure
- PDB id
- 4UJE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.9 Å
Loop
- Sequence
- UGGAUCUUGGGAG*CCCCUUGCCUCU*AAGCGUUUACUUUG*CUAGGAAUAAUGGAAUAGGACC*GGCCAUGAUUAAGAG*CAUUA
- Length
- 81 nucleotides
- Bulged bases
- 4UJE|1|B1|C|687, 4UJE|1|B1|U|688, 4UJE|1|B1|U|742, 4UJE|1|B1|U|743, 4UJE|1|B1|C|745, 4UJE|1|B1|C|797, 4UJE|1|B1|U|871, 4UJE|1|B1|G|873, 4UJE|1|B1|A|913, 4UJE|1|B1|G|921
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4UJE|1|B1|U|682
4UJE|1|B1|G|683
4UJE|1|B1|G|684
4UJE|1|B1|A|685
4UJE|1|B1|U|686
4UJE|1|B1|C|687
4UJE|1|B1|U|688
4UJE|1|B1|U|689
4UJE|1|B1|G|690
4UJE|1|B1|G|691
4UJE|1|B1|G|692
4UJE|1|B1|A|693
4UJE|1|B1|G|694
*
4UJE|1|B1|C|738
4UJE|1|B1|C|739
4UJE|1|B1|C|740
4UJE|1|B1|C|741
4UJE|1|B1|U|742
4UJE|1|B1|U|743
4UJE|1|B1|G|744
4UJE|1|B1|C|745
4UJE|1|B1|C|746
4UJE|1|B1|U|747
4UJE|1|B1|C|748
4UJE|1|B1|U|749
*
4UJE|1|B1|A|794
4UJE|1|B1|A|795
4UJE|1|B1|G|796
4UJE|1|B1|C|797
4UJE|1|B1|G|798
4UJE|1|B1|U|799
4UJE|1|B1|U|800
4UJE|1|B1|U|801
4UJE|1|B1|A|802
4UJE|1|B1|C|803
4UJE|1|B1|U|804
4UJE|1|B1|U|805
4UJE|1|B1|U|806
4UJE|1|B1|G|807
*
4UJE|1|B1|C|856
4UJE|1|B1|U|857
4UJE|1|B1|A|858
4UJE|1|B1|G|859
4UJE|1|B1|G|860
4UJE|1|B1|A|861
4UJE|1|B1|A|862
4UJE|1|B1|U|863
4UJE|1|B1|A|864
4UJE|1|B1|A|865
4UJE|1|B1|U|866
4UJE|1|B1|G|867
4UJE|1|B1|G|868
4UJE|1|B1|A|869
4UJE|1|B1|A|870
4UJE|1|B1|U|871
4UJE|1|B1|A|872
4UJE|1|B1|G|873
4UJE|1|B1|G|874
4UJE|1|B1|A|875
4UJE|1|B1|C|876
4UJE|1|B1|C|877
*
4UJE|1|B1|G|909
4UJE|1|B1|G|910
4UJE|1|B1|C|911
4UJE|1|B1|C|912
4UJE|1|B1|A|913
4UJE|1|B1|U|914
4UJE|1|B1|G|915
4UJE|1|B1|A|916
4UJE|1|B1|U|917
4UJE|1|B1|U|918
4UJE|1|B1|A|919
4UJE|1|B1|A|920
4UJE|1|B1|G|921
4UJE|1|B1|A|922
4UJE|1|B1|G|923
*
4UJE|1|B1|C|1019
4UJE|1|B1|A|1020
4UJE|1|B1|U|1021
4UJE|1|B1|U|1022
4UJE|1|B1|A|1023
Current chains
- Chain B1
- 18S Ribosomal RNA
Nearby chains
- Chain BE
- 40S RIBOSOMAL PROTEIN S4, Y ISOFORM 1
- Chain BH
- 40S RIBOSOMAL PROTEIN S7
- Chain BL
- 40S RIBOSOMAL PROTEIN S11
- Chain BN
- 40S RIBOSOMAL PROTEIN S13
- Chain BW
- 40S RIBOSOMAL PROTEIN S15A
- Chain BX
- 40S RIBOSOMAL PROTEIN S23
- Chain Bb
- 40S RIBOSOMAL PROTEIN S27
- Chain CR
- 60S RIBOSOMAL PROTEIN L19
Coloring options: