J6_4UY8_001

3D structure

PDB id

4UY8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Molecular basis for the ribosome functioning as a L-tryptophan sensor - Cryo-EM structure of a TnaC stalled E.coli ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

4UY8|1|A|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4UY8|1|A|G|45
4UY8|1|A|G|46
*
4UY8|1|A|C|179
4UY8|1|A|G|180
4UY8|1|A|A|181
4UY8|1|A|A|182
4UY8|1|A|C|183
*
4UY8|1|A|G|214
4UY8|1|A|G|215
4UY8|1|A|A|216
4UY8|1|A|A|217
4UY8|1|A|A|218
4UY8|1|A|A|219
4UY8|1|A|G|220
4UY8|1|A|A|221
4UY8|1|A|A|222
4UY8|1|A|A|223
4UY8|1|A|U|224
*
4UY8|1|A|A|231
4UY8|1|A|G|232
4UY8|1|A|A|233
4UY8|1|A|U|234
4UY8|1|A|U|235
*
4UY8|1|A|A|262
4UY8|1|A|G|263
4UY8|1|A|C|264
4UY8|1|A|A|265
4UY8|1|A|G|266
*
4UY8|1|A|C|426
4UY8|1|A|U|427
4UY8|1|A|A|428
4UY8|1|A|A|429
4UY8|1|A|A|430
4UY8|1|A|U|431
4UY8|1|A|A|432
4UY8|1|A|C|433

Current chains

Chain A

RRNA-23S RIBOSOMAL RNA

Nearby chains

Chain 2

50S RIBOSOMAL PROTEIN L34