J6_4V49_001

3D structure

PDB id

4V49 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of a Streptomycin Dependent Ribosome from E. Coli 70S Ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

8.7 Å

Loop

Sequence

GC*GGAAC*GGAGAAGAAAG*CGAUU*AUCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

4V49|1|B0|A|200, 4V49|1|B0|U|211, 4V49|1|B0|A|242, 4V49|1|B0|A|443, 4V49|1|B0|U|444

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V49|1|B0|G|44
4V49|1|B0|C|45
*
4V49|1|B0|G|156
4V49|1|B0|G|157
4V49|1|B0|A|158
4V49|1|B0|A|159
4V49|1|B0|C|160
*
4V49|1|B0|G|191
4V49|1|B0|G|192
4V49|1|B0|A|193
4V49|1|B0|G|194
4V49|1|B0|A|195
4V49|1|B0|A|196
4V49|1|B0|G|197
4V49|1|B0|A|198
4V49|1|B0|A|199
4V49|1|B0|A|200
4V49|1|B0|G|201
*
4V49|1|B0|C|208
4V49|1|B0|G|209
4V49|1|B0|A|210
4V49|1|B0|U|211
4V49|1|B0|U|212
*
4V49|1|B0|A|239
4V49|1|B0|U|240
4V49|1|B0|C|241
4V49|1|B0|A|242
4V49|1|B0|G|243
*
4V49|1|B0|C|439
4V49|1|B0|U|440
4V49|1|B0|A|441
4V49|1|B0|A|442
4V49|1|B0|A|443
4V49|1|B0|U|444
4V49|1|B0|A|445
4V49|1|B0|C|446

Current chains

Chain B0

23S RIBOSOMAL RNA

Nearby chains

Chain B2

50S ribosomal protein L34

Chain BV

50S RIBOSOMAL PROTEIN L28