J6_4V4A_001

3D structure

PDB id

4V4A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of the Wild Type Ribosome from E. Coli 70S Ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

9.5 Å

Loop

Sequence

GC*GGAAC*GGAGAAGAAAG*CGAUU*AUCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

4V4A|1|B0|A|200, 4V4A|1|B0|U|211, 4V4A|1|B0|A|242, 4V4A|1|B0|A|443, 4V4A|1|B0|U|444

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V4A|1|B0|G|44
4V4A|1|B0|C|45
*
4V4A|1|B0|G|156
4V4A|1|B0|G|157
4V4A|1|B0|A|158
4V4A|1|B0|A|159
4V4A|1|B0|C|160
*
4V4A|1|B0|G|191
4V4A|1|B0|G|192
4V4A|1|B0|A|193
4V4A|1|B0|G|194
4V4A|1|B0|A|195
4V4A|1|B0|A|196
4V4A|1|B0|G|197
4V4A|1|B0|A|198
4V4A|1|B0|A|199
4V4A|1|B0|A|200
4V4A|1|B0|G|201
*
4V4A|1|B0|C|208
4V4A|1|B0|G|209
4V4A|1|B0|A|210
4V4A|1|B0|U|211
4V4A|1|B0|U|212
*
4V4A|1|B0|A|239
4V4A|1|B0|U|240
4V4A|1|B0|C|241
4V4A|1|B0|A|242
4V4A|1|B0|G|243
*
4V4A|1|B0|C|439
4V4A|1|B0|U|440
4V4A|1|B0|A|441
4V4A|1|B0|A|442
4V4A|1|B0|A|443
4V4A|1|B0|U|444
4V4A|1|B0|A|445
4V4A|1|B0|C|446

Current chains

Chain B0

23S RIBOSOMAL RNA

Nearby chains

Chain B2

50S ribosomal protein L34

Chain BV

50S RIBOSOMAL PROTEIN L28