J6_4V4S_001

3D structure

PDB id

4V4S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the whole ribosomal complex.

Experimental method

X-RAY DIFFRACTION

Resolution

6.76 Å

Loop

Sequence

GC*GGAAC*GGAGAGGAAAG*CGACU*ACCAG*CUAAGUAC

Length

36 nucleotides

Bulged bases

4V4S|1|BA|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V4S|1|BA|G|45
4V4S|1|BA|C|46
*
4V4S|1|BA|G|179
4V4S|1|BA|G|180
4V4S|1|BA|A|181
4V4S|1|BA|A|182
4V4S|1|BA|C|183
*
4V4S|1|BA|G|214
4V4S|1|BA|G|215
4V4S|1|BA|A|216
4V4S|1|BA|G|217
4V4S|1|BA|A|218
4V4S|1|BA|G|219
4V4S|1|BA|G|220
4V4S|1|BA|A|221
4V4S|1|BA|A|222
4V4S|1|BA|A|223
4V4S|1|BA|G|224
*
4V4S|1|BA|C|231
4V4S|1|BA|G|232
4V4S|1|BA|A|233
4V4S|1|BA|C|234
4V4S|1|BA|U|235
*
4V4S|1|BA|A|262
4V4S|1|BA|C|263
4V4S|1|BA|C|264
4V4S|1|BA|A|265
4V4S|1|BA|G|266
*
4V4S|1|BA|C|426
4V4S|1|BA|U|427
4V4S|1|BA|A|428
4V4S|1|BA|A|429
4V4S|1|BA|G|430
4V4S|1|BA|U|431
4V4S|1|BA|A|432
4V4S|1|BA|C|433

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain B7

50S ribosomal protein L34

Chain BF

50S ribosomal protein L4