J6_4V5M_001

3D structure

PDB id

4V5M (explore in PDB, NAKB, or RNA 3D Hub)

Description

tRNA tranlocation on the 70S ribosome: the pre-translocational translocation intermediate TI(PRE)

Experimental method

ELECTRON MICROSCOPY

Resolution

7.8 Å

Loop

Sequence

GC*GGAAC*GGAGAGGAAAG*CGACU*ACCAG*CUAAGUAC

Length

36 nucleotides

Bulged bases

4V5M|1|BA|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V5M|1|BA|G|44
4V5M|1|BA|C|45
*
4V5M|1|BA|G|179
4V5M|1|BA|G|180
4V5M|1|BA|A|181
4V5M|1|BA|A|182
4V5M|1|BA|C|183
*
4V5M|1|BA|G|214
4V5M|1|BA|G|215
4V5M|1|BA|A|216
4V5M|1|BA|G|217
4V5M|1|BA|A|218
4V5M|1|BA|G|219
4V5M|1|BA|G|220
4V5M|1|BA|A|221
4V5M|1|BA|A|222
4V5M|1|BA|A|223
4V5M|1|BA|G|224
*
4V5M|1|BA|C|231
4V5M|1|BA|G|232
4V5M|1|BA|A|233
4V5M|1|BA|C|234
4V5M|1|BA|U|235
*
4V5M|1|BA|A|262
4V5M|1|BA|C|263
4V5M|1|BA|C|264
4V5M|1|BA|A|265
4V5M|1|BA|G|266
*
4V5M|1|BA|C|426
4V5M|1|BA|U|427
4V5M|1|BA|A|428
4V5M|1|BA|A|429
4V5M|1|BA|G|430
4V5M|1|BA|U|431
4V5M|1|BA|A|432
4V5M|1|BA|C|433

Current chains

Chain BA

23S RIBOSOMAL RNA

Nearby chains

Chain B7

50S RIBOSOMAL PROTEIN L34