J6_4V66_002

3D structure

PDB id

4V66 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the E. coli ribosome and the tRNAs in Post-accommodation state

Experimental method

ELECTRON MICROSCOPY

Resolution

9 Å

Loop

Sequence

AGG*CGAAC*GAAAAGAAAU*AGAUUC*GAGCAG*CUAAAUACU

Length

39 nucleotides

Bulged bases

4V66|1|BB|A|222, 4V66|1|BB|A|223, 4V66|1|BB|G|263, 4V66|1|BB|C|264

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V66|1|BB|A|44
4V66|1|BB|G|45
4V66|1|BB|G|46
*
4V66|1|BB|C|179
4V66|1|BB|G|180
4V66|1|BB|A|181
4V66|1|BB|A|182
4V66|1|BB|C|183
*
4V66|1|BB|G|215
4V66|1|BB|A|216
4V66|1|BB|A|217
4V66|1|BB|A|218
4V66|1|BB|A|219
4V66|1|BB|G|220
4V66|1|BB|A|221
4V66|1|BB|A|222
4V66|1|BB|A|223
4V66|1|BB|U|224
*
4V66|1|BB|A|231
4V66|1|BB|G|232
4V66|1|BB|A|233
4V66|1|BB|U|234
4V66|1|BB|U|235
4V66|1|BB|C|236
*
4V66|1|BB|G|261
4V66|1|BB|A|262
4V66|1|BB|G|263
4V66|1|BB|C|264
4V66|1|BB|A|265
4V66|1|BB|G|266
*
4V66|1|BB|C|426
4V66|1|BB|U|427
4V66|1|BB|A|428
4V66|1|BB|A|429
4V66|1|BB|A|430
4V66|1|BB|U|431
4V66|1|BB|A|432
4V66|1|BB|C|433
4V66|1|BB|U|434

Current chains

Chain BB

23S rRNA

Nearby chains

Chain BV

50S ribosomal protein L34