J6_4V68_001

3D structure

PDB id

4V68 (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus 70S ribosome in complex with mRNA, tRNAs and EF-Tu.GDP.kirromycin ternary complex, fitted to a 6.4 A Cryo-EM map.

Experimental method

ELECTRON MICROSCOPY

Resolution

6.4 Å

Loop

Sequence

GC*GGAAC*GGAGAGGAAAG*CGACU*ACCAG*CUAAGUAC

Length

36 nucleotides

Bulged bases

4V68|1|BA|A|223

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V68|1|BA|G|44
4V68|1|BA|C|45
*
4V68|1|BA|G|179
4V68|1|BA|G|180
4V68|1|BA|A|181
4V68|1|BA|A|182
4V68|1|BA|C|183
*
4V68|1|BA|G|214
4V68|1|BA|G|215
4V68|1|BA|A|216
4V68|1|BA|G|217
4V68|1|BA|A|218
4V68|1|BA|G|219
4V68|1|BA|G|220
4V68|1|BA|A|221
4V68|1|BA|A|222
4V68|1|BA|A|223
4V68|1|BA|G|224
*
4V68|1|BA|C|231
4V68|1|BA|G|232
4V68|1|BA|A|233
4V68|1|BA|C|234
4V68|1|BA|U|235
*
4V68|1|BA|A|262
4V68|1|BA|C|263
4V68|1|BA|C|264
4V68|1|BA|A|265
4V68|1|BA|G|266
*
4V68|1|BA|C|426
4V68|1|BA|U|427
4V68|1|BA|A|428
4V68|1|BA|A|429
4V68|1|BA|G|430
4V68|1|BA|U|431
4V68|1|BA|A|432
4V68|1|BA|C|433

Current chains

Chain BA

23S rRNA

Nearby chains

Chain B7

50S ribosomal protein L34