J6_4V6K_001

3D structure

PDB id

4V6K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structural insights into cognate vs. near-cognate discrimination during decoding.

Experimental method

ELECTRON MICROSCOPY

Resolution

8.25 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

4V6K|1|AB|A|223, 4V6K|1|AB|U|431

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6K|1|AB|G|45
4V6K|1|AB|G|46
*
4V6K|1|AB|C|179
4V6K|1|AB|G|180
4V6K|1|AB|A|181
4V6K|1|AB|A|182
4V6K|1|AB|C|183
*
4V6K|1|AB|G|214
4V6K|1|AB|G|215
4V6K|1|AB|A|216
4V6K|1|AB|A|217
4V6K|1|AB|A|218
4V6K|1|AB|A|219
4V6K|1|AB|G|220
4V6K|1|AB|A|221
4V6K|1|AB|A|222
4V6K|1|AB|A|223
4V6K|1|AB|U|224
*
4V6K|1|AB|A|231
4V6K|1|AB|G|232
4V6K|1|AB|A|233
4V6K|1|AB|U|234
4V6K|1|AB|U|235
*
4V6K|1|AB|A|262
4V6K|1|AB|G|263
4V6K|1|AB|C|264
4V6K|1|AB|A|265
4V6K|1|AB|G|266
*
4V6K|1|AB|C|426
4V6K|1|AB|U|427
4V6K|1|AB|A|428
4V6K|1|AB|A|429
4V6K|1|AB|A|430
4V6K|1|AB|U|431
4V6K|1|AB|A|432
4V6K|1|AB|C|433

Current chains

Chain AB

ribosomal RNA 23S

Nearby chains

Chain Ae

50S ribosomal protein L34